Real-Time Squiggle Classification for Read Until

EasyChair Preprint 10937

Abstract

Nanopore sequencing has introduced the concept of "Read Until," enabling selective sequencing of specific DNA regions of interest. Real-time squiggle classification plays a pivotal role in Read Until by rapidly identifying target sequences. This article explores the development of real-time squiggle classification methods to enhance the performance of Read Until. By accurately classifying squiggles as they are generated during sequencing, researchers can make precise decisions about which reads to continue, enabling efficient targeted sequencing.

Keyphrases: CPU, GPU, XPU

@booklet{EasyChair:10937,
  author    = {Chris Liu and Kurez Oroy},
  title     = {Real-Time Squiggle Classification for Read Until},
  howpublished = {EasyChair Preprint 10937},
  year      = {EasyChair, 2023}}